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Serious alignment problem, requires review.
Zero, or more than one, overlaps
Half dove-tail &50 bp
Alignment identity &98%
Alignment length &50 bp
&2 gaps, each gap &25 bp, not marked as an SSR
&0 gaps, each gap &50 bp, not marked as an SSR
&0 gaps, each gap &500 bp, not marked as an SSR
&0 gaps, each gap &500 bp, marked as an SSR
Minor alignment problem.
Exactly one overlap
Half dove-tail &0 bp and <=50bp
Alignment identity &99.1%
Alignment length &2000 bp
&0 gaps, each gap &25 bp, not marked as an SSR
&0 gaps, each gap &50 bp, not marked as an SSR
&0 gaps, each gap &500 bp, not marked as an SSR
&0 gaps, each gap &500 bp, marked as an SSR
Excellent alignment, meets all defined criteria.
Exactly one RuleInfo
Half dove-tail &=0 bp
Alignment identity &=99.1%
Alignment length &=2000 bp
&=0 gaps, each gap &25 bp, not marked as an SSR
&=0 gaps, each gap &50 bp, not marked as an SSR
&=0 gaps, each gap &500 bp, not marked as an SSR
&=0 gaps, each gap &500 bp, marked as an SSR
Certificate submitted, not yet approved.
Certificate submitted and approved.
Valid, contained clone
Join not evaluated due to one accession not being finished.
Curator Links
Alignment for AC and AC
TypePoint1Point2Orient1Orient2CuratorCommentTimeIdAlignmentReleases
Switch Points
A164296171624+-chenhcTaxid 10090 chrom 16 Primary assembly 02:20:41.333735808095GRCm38, MGSCv37
Mismatches = 0, Gaps = 0, Length = 15623
Percent identity = 100%
Score = 3.097e+04 bits (15623), Expect = 0
2 BAC and 2 Fosmid bridging clones.
2 BAC and 2 Fosmid concordant clones.
0 BAC and 0 Fosmid discordant clones.
gaattcaacgaaaatgaaggtataacatacccagatttatgggacacaatgaaagcagtg 148733
ctaagaggaaaacccagctctgagtttccaaaaggaaactggatggtgcatacacgagca 148793
gcttaacagcacacctgtaagctctagaacaaaaaagaagcaaatacacccaagaggagt 148853
agacatcaagaagtaatcaaactcagagctgaaatcaaccaagcagaatgaaaaagaact 148913
gtacaaagaatcaacaaaaccagaatctggttctttagaaaatcagcaagatagattaat 148973
ccttagccagactaaccagaggcacagagacagtatccaaattaacaaaatcagaaatga 149033
aaggagagatacaacaacaaaaactgagaaaaatttttaaaaatcaccagatcctactac 149093
aaaagcttatattcgacaaaactggaaaatctggatgaaatggataattttctagacaga 149153
taccaaatacgaaagttaaatcaggatcagataaaccatctaaactgtcctgtaacccct 149213
aaagaaatagaagcagtcattataagtttcccaaccccccaaaaaacaaaaacaaaacaa 149273
aacaaccaaccaaacaaacaaacaaaaccaacctagaaccagatcgttttagtgcagaat 149333
tatatcagaccttcaaagaagacctaataccaatactcttcaaactctactacaaaatag 149393
aaacagaatgaaaactccctaattcattttatgaagtcacagtaatactgagtattcttc 149453
cttggagatggaattgtttctctctagtcaggaacttgtcacagtttcctttcacagagg 149513
gcttcataagagatttttttctacttctaccatttttaatgttccaaaaagattttaaga 149573
attggttgactgtatattacttttagcttcagaagatatcatgtatatttaaggggcatt 149633
taactattataaattattttgatgactcaaaaatgtcaatacttagttgtatattttaaa 149693
aaatgttattagtttaataaaaaataaaaagagatgcattctcccattcttctgtggagt 149753
actctaataacactcgtctctctgttttgaaggattaccatttcagttgcctcttttgct 149813
caataaaaaaatgaagctcaaggtccagactgaggaataagatcatgcattcaacaccaa 149873
cctatgatatatagctgacactgtgtctctctaaaaatgaaaaatgctagatattctatg 149933
tacattatcagttacctgacaaactcaaaggcctgcattggatactgagaagagagagag 149993
agagagagagagagagagagagagagagagacagagacagagacagagacagagacagag 150053
acagagacacagagagacagagagacacagagagacacagagagactcagaaacacagag 150113
acacagagagacagagaagacaaggaaatgagaagactatagtatatatttatcactgaa 150173
tattttctttataaaatggtttctggcacatattgcctaataaatacttactaaaggtag 150233
aaattaagaattataaattaacacatggcactatgtatataagtaaatttattatcatac 150293
atataatcatatacatgtatatatataagtcaaggtctattatattttaatgaatatgtg 150353
tacatatataatttaaagtaggtattattcttcaatgttttttgtatgtacttaagtcat 150413
tttacttgttcatcaaggaaatacagtttaacgtgaggactacatatgcaccaaatatct 150473
gaaaccaatgtcatgtgtttgagaatgtgcagaaacaatacacctcacatgtacgctgct 150533
gaagggagtctaaattctgtagtactcaggaaaactgttaatgttcttatactgagtata 150593
atcattctctacaagcagtgagactactcctaacataaacctaatgaagtacatacatgt 150653
gttctccaaaaaacatgaataaagaagtccacaagagcattacttgtcatgatggaaatg 150713
gaactgcaagttatgaatatattttatgccacactgcagtagataggcccatatttatga 150773
gtaaaatggcaggacacattggaataggtaggttattttttaaaaaggtcatgaatgtgt 150833
catatggaggtgagggtggatctgagaggagcttgaggagtagggagtatatataattac 150893
aacacatcatatgaaattctcaaataattaacaaatgaattaaaacaatatattacataa 150953
atcatggtattatacaaaggaattcactcaaaattatatttaatgaactatgtttcctct 151013
aaaattatggataaatcctatcaatatattaaagaaccagtagcaaatgaatacatgtta 151073
agtggtcatgtactttttttttcaactttctttaatcaacaaataaaatatacccatagt 151133
gtaaggagctagaatatgaagattgtgggggttcgaaataagaatggctaccgtaggctc 151193
atgtatttgaatgttggtcctcaaggagtgagatgacaggagagaaattagaaggtgtgg 151253
ctttgttaagagtaggtgtggcctacaaaagcatcataaacctctcaaaggcatgaggca 151313
agtttcttgcgttcatcagccagttctgtgcttatgctttccctgggctgatttgtgaga 151373
ctgtggtcttctaacaatcttttacttttctgcacttcagcatttttatttctataacac 151433
aattaatgttacctgactcacagcgatgaatacaatgagaacacgcagtcatctgacata 151493
agtcaccacaaacattttagtttccataggtagtttggtccttgcctccaggaaaggatt 151553
aaacaaaaaacatgaaacccaaactagcaacaaaataataaacaaacaaacaaacaaaca 151613
aataaatagatttttaaaagtaaccacactgtccatcccttatcctataacagtttctct 151673
actgctctcctcctcctcctcctcctcctcctcctcctcctcctcctcctcctcctcctc 151733
ctcctcctcctccttctcttcctcctcctcttccttctcatgcctttccaggttctgttc 151793
tgtactatagttggagctatttcctgagagaagttttccttatccttccttccttccttc 151853
cttccttccttccttccttccttccttccttccttccttccttccttcctttctttatta 151913
attttacttgctgctgtaattgactgcaggatctccttcaggctaagcagaagcttactc 151973
actaaaccttagcccctcttttcagtttaccatattttttgttcctgaattcaaatttga 152033
gagatttattatttttaaattatgcttgtgacatggggtatgtgtccctgagtgcatata 152093
ccctccgaggatacaagaggtttatgtatcccttagagcttgatttataggtgcttgtga 152153
gccttctgatgtaggtgcttgggaaagaccttgggtattcatgtagaacccaatatgctc 152213
ctaactcttacttactgagtcacctctcaagactccgcacttaagcactagttattatct 152273
taacctgaagaaaacaaatggactaaattttcttaattcaatcattcagaatgagcagaa 152333
aacaataggacaatatttattgaattcttaaattagggaagcttgcagtgatagaggaat 152393
ccacaagacaaattatttatagacatgtcctggataggaatgattttcaaaagttagaag 152453
tcttttcttagattccaagaaagtgtcgagaaaagaggatgagattctactcacagtcat 152513
atatgttcaattcttaagcctgtttattaccattttagcataaaatacctatataggaaa 152573
ggaatcatatctttatgctagtaaatgtatcatttactatcaaatgtaaattctcaaact 152633
tcattctcacctggagaatgatttcaacaagacatcaagataaaaggttccttttacttc 152693
ccatgttccccacctatcttcctatatttctatcttatataaacagaagtaaataaaatc 152753
acccagataaattatcgatgtgaaacttggaatatgaccttgaaacatggaataaatgct 152813
tttttctgaagaatgcatttggctttgctttcactgcactagaatgagtagtcagcctac 152873
atttcaagaaaatgatattcatacttctccacaactaaaccaaccaaccaatcaaccaac 152933
cagccaaccaaccaaccatacaaacaacaactacaatcaaaacaaataaaaccaaagaaa 152993
ccaaaacctccaatccccaaaccaaccaactaaccaagcaaagtataccatagagctaag 153053
aactgggtgagtagggaagaaggtcaatttgaaaagaatttggaaattgaatgactatgg 153113
tccaaactctttggacaaaattctaaaagaactattgaatgttttaaaagagggagtaca 153173
aaaatccataaatatatggaaaaaatactaaacatccttatctgtgatggatgagaaggc 153233
taaaactacactgagacgccatctcaccttagctggaatgacaacaaatgctggcaatta 153293
ttcagggaaagaggtacccttagagtctgttggtggctgtaaactagcacatccatggta 153353
gaactcaccacagaaaggattctaagtcaatgtcccacaggcatatttacacatctgtgt 153413
ttattatagcatcattggtaaaacaaacccattgaatcagcctaggtacctgtcttagtc 153473
agggtttctatttttgcacaaacatcatgaccaagaagcaaattggggaggaaaggattt 153533
atttggcatacacttccatactgctgttcatcaccaaaggaagtcagaactggaactcaa 153593
gcaggtcagaaagcaggagctgatgcagaggccatggagggatgttctttactggcttgc 153653
ttcttctggcttgctcagcctgctctcttatagaaccaagattaccagcccagagatggt 153713
tccacccacaaggggccttttacccttgatcactaattgagaaaatgccttacagttgta 153773
tctcatggaggcatttcctcaactgaaactcctttctctgtgataactccagctgtgtca 153833
agttgacacaaaactagccagtacagtacccatcaacagacaaatgccatcttgacattt 153893
gtctcagagtgaatgaaaagctttcctatcattctttgttgcactcttttatgtgcccag 153953
atcccaggccccaaccccaagcttctaactccaactggagtctttgcatttcaaaatagc 154013
tacaaccctatcctatccagaagacttcctcctacttgaaagcagagaaaacactgttct 154073
gtgggtttgtggtcagaaagtcactatgcctcagctgaaatgtacattaacaatacattt 154133
tctgaggcttcttttcagcttcttattatgtttaaataaacacaaatttaaagttttaag 154193
tctctttaatatcgatgaataggtttctgtcttcatctgccagtcaaattcggactaata 154253
aaattgactttttccaggacaacaatctcataatccttgtgctctatcctctgtgaagac 154313
tctgagaacaagtgccagtgttaagagatatatatttccatattacagtggtgtagtcaa 154373
atacaacctgtctctatctttaatgattaacattttatttgctttttctgaacaatagaa 154433
ggtaacatactctgcagacagaggaaggaggatcatgcattcaagaccaacctatggttc 154493
atagtgagactgtatctctgaaaaaagtaatatggctggagattctatatatattatctg 154553
tggtagaatgcttgcctaacacattcaagggcctgcactggatcctcagaactagaaaag 154613
ggccagagaactacagtatgttcttcaacacttgcatatcaagtttctaaaatggtaccc 154673
aacaaatattacctaataagtatttattagggacaaaaataagaattataatttaaccaa 154733
tataaaataaattttatacacacacacacatgtgactgtagtggctattcctggttgtca 154793
gcttgactatatctggaatgaactacaatccagaattagaacgcttaccagtgatcctaa 154853
tctggaggctgggagatatgtctctgacctggatcttggcatggtgatcttgtggcctag 154913
tggctatgaattccagaagattaaatcagggagatctctgagttcaaggtcatctgggag 154973
gtggcacacatctttaatctgggtcataccttctgctggagaccaacataaggacattgg 155033
aagaagaaagatttactctctcctttgtctgcttgctttgtgggacagagcaactgcaag 155093
atccttcaacttccactcacagctgctgctgaccattgttgggagttggactacagactg 155153
taagtcatcaacaaattccctaactatatagagacctagagaatcctgactaagacatat 155213
gaccaaatttgtattttaatcctaatgtatatatttacctgatgtattatgtacatatgt 155273
acccaaaagtatgtattattccacacctaactgtatagtttatacacttaaggtgttcaa 155333
cttggttatcaagaaaataaaggttaaactgaggaccacatatactagatgtctaaatga 155393
atggtgaacaaagacaagtttgattggcaaggtgtagaaataacacacctcacacatact 155453
gctgaaaggagtttgaattctcttggacactcagtggaaatacttggggctatcttatca 155513
atgaacaaaagcatctctacaagcagtaagaccaatcataacataaaactagtagatgta 155573
cacacatgccttctccaaaaatatgaacaaaggaacatttcataggaacatttatcatta 155633
tgaaagcgaaattgcaaattaagaacagactttatgacacactgcagtggataaatccac 155693
agtcactggtaaagggacagaataatgtggattcagtttaatttttaaaaagaacatgag 155753
tttagctggcaggagtaggtgaggatgtatctggagaggaatagagatagaagtaggggg 155813
taagtatgataaaatgcaatgtatgaaatactcaaataactaatagcaatatattaaaaa 155873
taatcgattgcataaattatagcattacacaaaggaattcattacacattgagatttagt 155933
gaactacatttcctctaaaaatgtaattaaatctatcaacaaattaaagaaatcagacac 155993
aaatgaacagatggtaagtggtcatctatttttttttaatcagcaacagataaacccata 156053
gtgtggggagataggatatggagagtataagggaagaagtctgaacgctgctctggaaca 156113
tgatctcttcttccctagtgtctatgttatttaaatacgaaggtcaaaaacccagccaca 156173
gaatttgatcctccccacttatataatgtcaaacatttttcactaatttcaccttcatga 156233
taaagttacaagcaagtttgtaccaaatattttttcaaaataaatgccatgaatttaaac 156293
tgtcttgaagcaacacaagcatcccaaccccaggacaagttagttattagagaaagcttg 156353
tgttcatcacccagttctttgctctgatggttttgagttcccacaaacagtttagtttcc 156413
atgggtagtttggttcttgccttctgggaaggattaaacaaaacacataaaagtccaaac 156473
tagaccctccccccaaaaaaagtagcattcatgctgcccatccctcatcccacaacagtt 156533
ctctactgctctgattctcctccccctcctccccatgtcttcccgggttctgttctccac 156593
tatagttgaagccatttcatgaaaaaaaaaaaaacttcctcattatgcattttatttaat 156653
accttattatttattgttgttatggattgaacccaggacctcattcatgctaagcagaat 156713
ctttatcatgaattttttcgtttctgcttctgatttttttcataaagggatcctatttct 156773
ttttatttttaattatgctggtggcatggggcatgtacccatgagtacatggaactcaga 156833
aaatacaagaggcctttgagtcccctagtgttggatttacaggtgtttgtgagccttctg 156893
atgcaggtgcttagaacagaacttgagtccttcaacagagtattatattcccataactct 156953
tatctattgagctgctgtgtctcaaagcctctcctccaggattcttaaatgacactggat 157013
actgccttaacctgaagaaagcttatgggttaaaggctgttaattcaatcattcaaaata 157073
agcagaaaaaaacaatacaatgatgtttgttgaattcttacattagctcagcttatgata 157133
gagaaatccataaggcaaattatttataggcttgcccatataatacaagagtcttaatga 157193
caacaaagaggcttaaagcaagccattctcaacattaaaaggtatgtgtgttgttgactg 157253
tgaacacagagcataatctaaagacaaaaaagatgttgtgaagtgatcgttagcacctag 157313
ttggccttcttccttctttgttacataaagcagataaaaaggaaacgatctaatttgagc 157373
aagttgggcacacctcagaagctgtgttcccaccttcattcacatcatttttctattcgc 157433
tatagtcattgtttcaaacatgttcatgttacatgatttacgagctatgtaattatatag 157493
gtatgtggatgacccactgaacctatctgacattcctctttacctagtaaaagtaaatgt 157553
cctatgacctagtattccagctaaacatccataaaagaaaatagacttacctgattcttg 157613
tgcacagagagaaagtattaagagatggtggatgcaaaggagtgaacagtccatcaaatc 157673
tgatgatgaaagtctctttctaacagtcacaatattgtgtttcctagctgaactgaaagt 157733
cttgcctcatcccaatgtttcccactgaagttattcattaactgggaggtttgcctattg 157793
gaattgatttggtgccaacagaagtgggtggttctatccttgagctggtggtcttgaggt 157853
ctataagaaagtgggctaagtaaaccatgcaaaacaaaccagtcagcagaatccctccat 157913
agcctctgcatcagctcctgcctccaggtttcttcactgtgtaaattcctgctcccattg 157973
cttttgatgatgaactgttatctgaaaatgtgaggaaaataaaccctttcctctgccaag 158033
ttgcttctgctcatggtgtttcatcacagcaatagtaagtctaactaagatacctccttc 158093
ctcagtttttaaaacaacaatttctgtgaaggtttggtgctgttcatcttttgcctcggc 158153
acccaggtggcaaagatagtcagatctctgtgagttggagtccatccaggtaagcactac 158213
ataaagagtttcagatactcagaaagacacagtggattaattgaagaggaaaagaggaat 158273
gggggagagaggaggaattggagtgagaaaagggaaaggaaaattatgcagatagagggt 158333
tcatggtgtgaaattcttagaaatcacattcaaataatattttatgttgcactccattgc 158393
aacaattttcaatttcctgggtttcctaccctctagggttttttttcccataaacgttat 158453
gttccacaggtgatgtggggttcttctatgatgtaattcccaggttctttgtgttaggtg 158513
acagagaattgaacaagacccagaaaagcagtagtgaaatggtagatttttttaatggca 158573
cagtaaagcagaaagtatacccatagacagaaaagtgggtcaatctcacttgtgatccaa 158633
gaaccatgagttcttacctggggttcctattatggatctagatgaagtgaggagctaaga 158693
ggaagaaataaagtggattcttatctttgagagacagatgggctattaacttaagctcct 158753
ataaacttcattataaaatggggaacagcgattagatactattattgtaaacagtgtaag 158813
gattaaagaaagctctacagcatctgttatcatggagaacacaaatatttgttcacaagg 158873
ctggggcatatgtgattctgttttactgcactctatttgtgttgagtcaggatgtaaggg 158933
agaagagcttccttacccacagtcttagctagggtttcattgctgtgaagagacactgtg 158993
accaaggcaaatgttataaatgaaaacatttgattggggctggcttatagtttcagaagc 159053
ttagtcctttattgccatgctgggaagcatgacaatgaccatagtgctggagaagaagcc 159113
aagagttgtatatcttgatccacaggtaacaaggtagagagtgttgttccactggggatg 159173
ctttgagcatatataagacataatagcctgcctccacagtgacacacttcctctaacaag 159233
actataccttctactaatgtcacttcctatggaccaaatattcaaacacatgagtctgtg 159293
gcagccatacctattcaaaccacaatgcccacttattccaatgaccaattctattcccag 159353
taggacaacttctcatattccattcctatgggaagtatgtgtttagccacatcctggtag 159413
gaaagattttaaaaagagcctcatctgagattctcagaaagtgtacagaagcaaatggac 159473
aaggacttattaaaagtcataaatgttcagaccccgagtgcgatttgttgacagtttaac 159533
ataaaatttgagagggtttgtttctttgtgctagtaatcttcatatcaaattgtgctgaa 159593
cttcttcattctgaggtggagagggattccaacaagattccaggatgaggacattcttcc 159653
tcttctcatgctcccaacatgcttcctgtatttctatcttatctttaaagataagtaaaa 159713
tttcccagactatttgtgtgaaactaaaacagagaccttgaacccaggagataatgacat 159773
tctctcaagaatgcaattgcccttggcttctcagaactgggatcaatattcgtgagcata 159833
aacatgtatgtttatactactctccttaataatcaataacaaactaatcaaccacataag 159893
caacaacaacaacaacaatccaaccaaaccaaaccaaactaaaacatctaatgccaaagt 159953
caaccaaccaatacaatacaaagagtttgtaaggaagatggggctggatctgggaggaat 160013
taaatgatgtgatgaaaatgatcaaaacacattgtacaaaattccaaaagaatgaataaa 160073
aaactttaaagattatgtaaaatattcataaacataaacagcaacaatagcaacaaaata 160133
taaaactcaacattcatatcagggaagtgcaaattaaaactatattgagatcccacctca 160193
catcaattggaatgacaagaaatagtaacaaatggtggcaattatgcagggaaaggaata 160253
tccttagacactcttagtggcctgtaaattaacacttacacactgtaactcctcatgaaa 160313
aggattctaaatcaatattccacagaaatatctgcatgttcatgtttattatagcatcat 160373
ttaaaatacaatatacagaagaatcagcctaggtaagagatgaatggataataaaaatat 160433
ggaatatatacaaaatagagtgtcctgtgttcatgaagaatgacattaacaataaataaa 160493
ggataatttttctggaagatggctgcagctggccatcaacttacaagcaaaataggtcag 160553
ccttagaaagacaaatgtcaacttttctctaacttgagtgtcctagatttttttatatac 160613
atataaaccatatgtatttatctccatagataacatgaaagcaggaatctgtaataatga 160673
ggggagtggtaaagacgtaaaaagagaaagagcaagttatcaatgatggatatggtcaaa 160733
tttcatgatctgctcaaaagaaatgttttttttagacccacacaatggagcacttgtcag 160793
tatcaataaccgttctacaagcatgaatacataccggttatttcatttaataatataatt 160853
ctatctctagtataaggtatatatttcattatcatattttccatctagatgattagaaat 160913
actcctaacctctatttcattaaaaattgtaggcattttattatcagttttaaaatcttt 160973
tcatggtatctttgaccattcactaaaatgggtttacactgttaacttgtggagacaatt 161033
cccttcagtgatctctgatgtttggagttgtcaggctgtataaggctgggaaagttttgg 161093
tggtttctatgagttttagaccagccagagctaaatgatgatactctgtcttcaaacaaa 161153
caaacaaacaaacaagcaaacagaaagacagacaaacaaacaaacaacacttaaaaagtg 161213
aagcaatttagacagaaacaatatccctgtgaaaatcgtgtgacccagtatcatttagtt 161273
agcaaccttagattcattgcctagacaagatttatcaagagactattgacagaattgtcc 161333
ttgaatcacccagtttattgcaaagcctcatcccacagaccattgcttctcaacctgagg 161393
ttctcgaaccctttgagggtcaaaagaccctttcacagtgattgcctaagaccatctgct 161453
tttcagatatctacataaccgttcataatagtagcaaaattacagctatgaaataccaaa 161513
aaaataattttttggttgtgggacaccacaacatgaggaattgcttaaggaaccacagca 161573
ttaggaaggttaaaaaacattgtcatgagtctgcacaagtgagagtgtgcactacagaag 161633
ctaacagcttctgggacaggtgggagccacagagtttctgaggaagtgcccttttcgggc 161693
tccagatatctggccaccttccccgtcagaggacaggtgtccgcccagactgggaggctt 161753
ttgcctcagaatcggcagaagacatcttggttccgggactcctctgaaagtagtctgcac 161813
aggtgagagtgtgcactacagaagctaacagcttctgtgacaggccaaagcaacacagct 161873
tctgggaaaggtcctgttttggggctttatcttcggccaggaggaggtccaaatgccaga 161933
tatctgtgcaccttccctgtaagaggagagcttgcctgctgagagtgctctgaccactga 161993
aactcagaggagagagctagtctcccaggtctgctgatagagggtaacagaatcaccaga 162053
ggaacaatttctaaacagagacaactataagaactaactccagagattaccagatggcga 162113
aaggtaagaaaggtaaatgtaagaatcttactaacaggaaccaagaccactcaccatcat 162173
cagaacccagcactcccacttcgtcccgtccagggcaccccaacacacccgaaaagctag 162233
acctggatttaaaagcatgtctcatgatgatggtagaggacattaaaaaggaatttaata 162293
actcatttaaagaaatacaggagaacactgctaaacaggtagaagacattaaagaggaag 162353
cacaaaaatcccttaaaaattgcaggaaaacacaaccaaacaggtgatggaattgaataa 162413
aaccatccaagacctaaaaagggaagtaaacacaataaagaaaacccaaagtgaggcaac 162473
attggagattgaaaccctaggaaagaaatctggaaccatagttgccagcatcagcaacag 162533
aatacaagagatggaagagagaatctcaggtgcagaagattccatagagaacatcggcac 162593
aacaatcaaagaaaatggaaaatgcaaaaagatcctaactcaaaacatccaggaaatcca 162653
ggacgcaatgagaagaccaaacctacagataataggagtagtatcaaaggataataacaa 162713
aaaaaaaaaaacaaaaaaacaatacaaggacagaaacaacgtcctagaaaaagcaagaag 162773
ttaatccctcaacaaacctagaagaagacagccacaagaacagaatgtcaactctaacaa 162833
caaaaataaaaggaagcaacaattacttttccttattatctctaaatatcaatggactca 162893
attccccaataaaaagacatagactaacagactggctcacaaacaggacccaacattttg 162953
ctgcttacaggaaacccatctcaggaaaaaagacagacactacctcagaatgaaaggctg 163013
gaaaacaattttccaagcaaatggtctgaagaaacaagctggagtagccattctaatatc 163073
taataaaatcgacttcctacccaaagtcatcaaaaaagacaaggaggggcacttcatact 163133
catcaaaggtaaaatcctccaagaggaactatcaattctgaatatctatgctccaaatac 163193
aagggcagccacattcattaaagaaactttagtaaagctcgagcacacattggacatcac 163253
acaataatagtgggagacttcaacacaccactttcaccaatggacagatcgtggaaacag 163313
aaactaaaatgggacacagtgaaactaacagaagtgatgaaacaaatggacttaacagat 163373
atctacagaacattttattctaaaacaaaaggatataccttcttctcagcacctcatggt 163433
accttctccaaaactgaccacataattggtcacaaaacaagcctaaacatatactaaaat 163493
attgtaattgtcccatgcatcctatcagatcaccacggactaaggctgatcttcaataag 163553
aaagtaaataatagaaagccaacattcacgtggaaactaaacaacactcttctcaatgat 163613
accttggtcaaggaaggaataaagaaagaaattaaggactttttggagtttaatgaaaat 163673
gaagccacaacatacccaaacttatgggacacaatgaaagcatttctaagaggaaaactc 163733
gtagctatgagtgcctccaaaaagaaactagagagagcacatactagcagcttgacaaca 163793
cacctaaaagctctagaacaaaaggaagcaaattcacccaagaggagtagactgcaggaa 163853
ataatcaaactcaggggcgaaatcaaccaagtggaaacaagaactattcaaagactcaac 163913
caaacaaggagctggttctttgaaattcaacaagatagataaacctttagccagactcac 163973
tagagggcacagggacagcatcctaattaacaaaatcaaaaatgaaaagggagacattaa 164033
caacagatccttaagaaatcccaaacaccatcagatccttctacaaaaggctatactcaa 164093
caaaaccggagaacctggatcaaatggacaagtttctagacagataccaggtaccaaagt 164153
taaatcaagatcacgttaatggtctaagcagtcctatatcccctaaaggaatagaagcaa 164213
tcagtaatagtctcccaaccaaaaaaaaagcccacgaccagataggtttagtgcagagtt 164273
ctttcagaccatcaaagaagatc 164296
....................... 171625
IdTypeDateWhodidComment
13514ImportOldDb09/06/:00f_old_db
13515ReSetShortOvlp09/04/:48dbo
184497CreateSwitchPt04/25/:41chenhctpf_m_Builder 1.35 Toolkit wrapper version: built Mar 12 2009 using /netopt/ncbi_tools64/c++.by-date//GCC401-Release64/lib
Accession%idPosition (strand) Accession%idPosition (strand)
C3H-123P7AC99.38%pos 154337 (R-) AC99.39%pos 8286 (F+) AC99.38%pos 181584 (R+) &C3H-13D6AC99.85%pos 62207 (R-) &C3H-13K5AC99.61%pos 62289 (R-) &C3H-164P17AC99.87%pos 76133 (R-) &C3H-171E2&AC99.51%pos 132874 (F-) C3H-171F1&AC99.38%pos 132873 (F-) C3H-34H3AC99.62%pos 43177 (R-) &CH29-15G14AC99.02%pos 43 (R+) &CH29-173P22AC99.43%pos 67359 (R+) &CH29-181B13AC99.45%pos 20427 (R+) AC99.2%pos 60054 (F+) CH29-23A18AC99.17%pos 147074 (R-) &CH29-486O4AC99.1%pos 93553 (R+) &CH29-508K2&AC99.25%pos 41218 (F-) CH29-584L3AC99.25%pos 93353 (R-) &RP23-346L20&AC99.59%pos 12609 (F-) RP24-148N8&AC99.83%pos 56963 (F-) RP24-211K16AC99.09%pos 80899 (R-) &RP24-216O20&AC99.41%pos 4588 (F-) RP24-257C10AC99.78%pos 75472 (R+) &RP24-347F22AC99.14%pos 4965 (R+) &RP24-372B21&AC99.61%pos 102423 (F-) RP24-78E8&AC100%pos 68741 (F+) RP24-78H5AC99.34%pos 90338 (R-) &
Fosmid Ends
Accession%idPosition (strand) Accession%idPosition (strand)
WI1-1010E12AC99.6%pos 92397 (R-) &WI1-1029B19&AC99.27%pos 36309 (F-) WI1-1120L20AC99.76%pos 133581 (R-) AC99.74%pos 95586 (F+) WI1-1154B8AC100%pos 99626 (R+) AC99.41%pos 141661 (F-) WI1-1183L16AC99.71%pos 7340 (R+) AC100%pos 49679 (F-) WI1-1221P11AC100%pos 39251 (R-) &WI1-1231F19&AC100%pos 29003 (F+) WI1-1233P15AC100%pos 51466 (R-) AC100%pos 8786 (F+) WI1-125B2AC99.81%pos 56382 (R+) AC100%pos 93534 (F-) WI1-125D14AC99.18%pos 137394 (R-) AC99.21%pos 94328 (F+) WI1-1367D11AC100%pos 146475 (R-) AC100%pos 103620 (F+) WI1-1374I12&AC100%pos 4993 (F-) WI1-1392M21&AC100%pos 34066 (F-) WI1-1407G17&AC100%pos 160142 (F-) WI1-1430O17&AC100%pos 160193 (F-) WI1-1544K21&AC99.83%pos 31115 (F-) WI1-1565E12AC99.8%pos 21083 (R-) &WI1-157C15AC100%pos 27495 (R+) AC99.84%pos 64280 (F-) WI1-1681D9AC100%pos 36310 (R-) &WI1-1688N7AC100%pos 54100 (R-) AC100%pos 15712 (F+) WI1-1766J15AC100%pos 40796 (R-) AC100%pos 2188 (F+) WI1-1806I24AC100%pos 56816 (R-) AC100%pos 15378 (F+) WI1-1813N8AC100%pos 64955 (R+) AC99.28%pos 101999 (F-) WI1-1922G9AC99.63%pos 57104 (R-) &WI1-1964I7&AC100%pos 32194 (F-) WI1-2008M15AC100%pos 34732 (R-) &WI1-2026B11AC100%pos 37989 (R-) &WI1-2082E17&AC99.71%pos 18261 (F+) WI1-2086A14AC100%pos 2532 (R-) &WI1-2140G9AC100%pos 133022 (R-) AC99.82%pos 93242 (F+) WI1-2151N14AC100%pos 125986 (R-) AC100%pos 86380 (F+) WI1-2252G15AC100%pos 99140 (R-) AC100%pos 56260 (F+) WI1-2264K17AC99.6%pos 13167 (R-) &WI1-2279J3AC99.57%pos 22808 (R-) &WI1-227N16AC99.81%pos 9665 (R-) &WI1-2311K9AC99.68%pos 81984 (R+) AC100%pos 120707 (F-) WI1-2359P7AC100%pos 13119 (R+) AC100%pos 50812 (F-) WI1-2366D9AC100%pos 76378 (R+) AC99.42%pos 115542 (F-) WI1-2371M2AC100%pos 37344 (R+) AC100%pos 80218 (F-) WI1-2403P3&AC100%pos 10117 (F-) WI1-2410E20AC100%pos 58399 (R+) AC100%pos 98713 (F-) WI1-2422G19AC99.63%pos 17868 (R+) AC100%pos 51186 (F-) WI1-2533I5AC99.68%pos 52104 (R-) AC99.86%pos 13097 (F+) WI1-25N5AC99.46%pos 62639 (R+) AC99.71%pos 100110 (F-) WI1-2655L11&AC99.26%pos 22050 (F-) WI1-2705M19AC100%pos 55333 (R-) AC99.85%pos 15737 (F+) WI1-2728K5AC99.84%pos 1781 (R+) AC100%pos 40384 (F-) WI1-2750J24&AC100%pos 10118 (F-) WI1-2777A5AC100%pos 159617 (R+) AC99.27%pos 134472 (F+) WI1-2777I17AC99.76%pos 159617 (R+) AC99.69%pos 134469 (F+) WI1-2862K16AC100%pos 23620 (R-) &WI1-370G6AC99.2%pos 107960 (R-) &WI1-425E10&AC99.77%pos 17215 (F-) WI1-448P5&AC100%pos 37452 (F-) WI1-501O19&AC99.71%pos 29693 (F-) WI1-50M1&AC99.5%pos 6425 (F-) WI1-60P14AC100%pos 45726 (R+) AC100%pos 80069 (F-) WI1-699C6&AC100%pos 20138 (F-) WI1-699D13&AC99.82%pos 20138 (F-) WI1-746H8&AC99.52%pos 15594 (F+) WI1-923H20AC100%pos 80712 (R-) AC100%pos 41860 (F+) WI1-999I17AC100%pos 62852 (R+) AC100%pos 103229 (F-)
Simple_repeat
Simple_repeat
Simple_repeat
hAT-Charlie
MERVL_2A-int
Simple_repeat
Simple_repeat
Simple_repeat
Simple_repeat
Low_complexity
Simple_repeat
Simple_repeat
Simple_repeat
Simple_repeat
Simple_repeat
Low_complexity
Simple_repeat
hAT-Charlie
Simple_repeat
Simple_repeat
RLTR17B_Mm
Simple_repeat
Simple_repeat
Simple_repeat
Simple_repeat
Low_complexity
hAT-Charlie
hAT-Charlie
Simple_repeat
Simple_repeat
Simple_repeat
Simple_repeat
Simple_repeat
TcMar-Tigger
Simple_repeat
Simple_repeat
Simple_repeat
Simple_repeat
Low_complexity
Simple_repeat
Simple_repeat
Simple_repeat
Simple_repeat
Low_complexity
Simple_repeat
Simple_repeat
Low_complexity
Simple_repeat
Low_complexity
ORR1C1-int
Low_complexity
Simple_repeat
Simple_repeat
Low_complexity
Low_complexity
RLTR12BD_Mm
Simple_repeat
Simple_repeat
Simple_repeat
Low_complexity
tRNA-Ala-GCY_
Simple_repeat
hAT-Charlie
hAT-Blackjack
hAT-Charlie
hAT-Charlie
hAT-Charlie
hAT-Charlie
hAT-Charlie
hAT-Charlie
hAT-Charlie
hAT-Tip100
ORR1A3-int
Low_complexity
Low_complexity
Low_complexity
Low_complexity
Low_complexity
Low_complexity
Low_complexity
Low_complexity
Low_complexity
Low_complexity
Low_complexity
Low_complexity
Low_complexity
Low_complexity
Simple_repeat
Simple_repeat
Simple_repeat
Simple_repeat
Simple_repeat
Simple_repeat
Simple_repeat
Simple_repeat
Simple_repeat
Simple_repeat
Simple_repeat
Simple_repeat
Simple_repeat
Simple_repeat
Simple_repeat
Simple_repeat
Simple_repeat
Simple_repeat
Simple_repeat
Simple_repeat
Simple_repeat
Simple_repeat
Simple_repeat
Simple_repeat
Simple_repeat
Simple_repeat
Simple_repeat
Simple_repeat
Simple_repeat
Simple_repeat
Simple_repeat
tRNA-Ala-GCY_
RLTR13D3A1
RLTR20C1_MM
RLTR20C1_MM
RLTR20C1_MM
RLTR17B_Mm
RLTR17B_Mm
RLTR17B_Mm
RLTR51B_Mm
RLTR31D_MM
polypurine
polypurine
polypyrimidine
polypyrimidine
MERVL_2A-int
MERVL_2A-int
MERVL_2A-int
MERVL_2A-int
ERVB2_1A-I_MM-int
ERVB2_1A-I_MM-int
ERVB2_1A-I_MM-int